Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mir678-201ENSMUST00000102114 84 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm8202-201ENSMUST00000117682 310 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm13491-201ENSMUST00000118267 235 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm7927-201ENSMUST00000118818 880 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm14842-201ENSMUST00000119577 269 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm20545-201ENSMUST00000174739 210 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm22348-201ENSMUST00000178674 79 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm27887-201ENSMUST00000184367 102 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm28640-201ENSMUST00000190918 550 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm37838-201ENSMUST00000194464 312 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 AL807824.1-201ENSMUST00000223151 183 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 AC119241.1-201ENSMUST00000223651 534 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Snord38a-201ENSMUST00000083746 71 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm45516-201ENSMUST00000211588 4182 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm24469-201ENSMUST00000104487 131 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm6744-201ENSMUST00000119303 543 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm12543-201ENSMUST00000120410 543 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm12494-201ENSMUST00000121684 521 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm25384-201ENSMUST00000157807 105 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm25454-201ENSMUST00000157947 315 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm22085-201ENSMUST00000158344 110 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm25718-201ENSMUST00000158632 118 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm10105-201ENSMUST00000184601 270 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm28973-201ENSMUST00000189310 613 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Gm29781-201ENSMUST00000203862 478 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 AC153506.2-201ENSMUST00000218051 257 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 AC134420.1-201ENSMUST00000227027 289 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 AC154598.1-201ENSMUST00000227079 347 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 AC123665.4-201ENSMUST00000228790 249 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Mir342-201ENSMUST00000083502 99 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trim41Q5NCC3 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 AC134596.1-201ENSMUST00000222016 1922 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 AC110043.1-201ENSMUST00000220278 1627 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm22499-201ENSMUST00000104501 135 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm14652-201ENSMUST00000118479 235 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm13082-201ENSMUST00000118877 561 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm14517-201ENSMUST00000119040 337 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm28390-201ENSMUST00000185212 700 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm28146-201ENSMUST00000185517 701 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm28574-201ENSMUST00000185757 699 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm28397-201ENSMUST00000187970 699 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Npn2-202ENSMUST00000189275 235 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm29366-201ENSMUST00000190481 699 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm38291-201ENSMUST00000193671 259 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm43723-201ENSMUST00000196886 189 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm42758-201ENSMUST00000202146 283 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 AC117588.3-201ENSMUST00000228517 325 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Gm37078-201ENSMUST00000193314 2009 ntBASIC10.49□□□□□ -0.73
Trim41Q5NCC3 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms