Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm36998-201ENSMUST00000193205 704 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm44023-201ENSMUST00000203710 469 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm44389-201ENSMUST00000203795 182 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.56□□□□□ -1.68
Upf3aQ3ULJ3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm12173-201ENSMUST00000117622 273 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm12849-201ENSMUST00000120013 739 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm25058-201ENSMUST00000157365 128 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm22601-201ENSMUST00000157595 250 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm5066-201ENSMUST00000188479 822 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm18843-201ENSMUST00000194982 719 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm43853-201ENSMUST00000197162 301 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3aQ3ULJ3 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm25420-201ENSMUST00000104216 127 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm12931-201ENSMUST00000117046 324 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm14725-201ENSMUST00000120324 828 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm2182-201ENSMUST00000145243 663 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm22383-201ENSMUST00000158188 327 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm17109-201ENSMUST00000163985 358 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm8296-201ENSMUST00000185597 524 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm43855-201ENSMUST00000197462 507 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm45574-201ENSMUST00000210921 331 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3aQ3ULJ3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms