Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm24142-201ENSMUST00000101960 107 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm15603-201ENSMUST00000119252 492 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm22923-201ENSMUST00000174952 110 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm22395-201ENSMUST00000177427 96 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm19898-201ENSMUST00000177490 251 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm29031-201ENSMUST00000185316 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm29000-201ENSMUST00000185444 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm28204-201ENSMUST00000185934 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm28290-201ENSMUST00000186505 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm28161-201ENSMUST00000186669 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm28967-201ENSMUST00000187351 281 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm28749-209ENSMUST00000189599 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm33163-201ENSMUST00000194504 614 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm43922-201ENSMUST00000205071 328 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trafd1Q3UDK1 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm14172-201ENSMUST00000118255 644 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm11866-201ENSMUST00000120209 335 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm12087-201ENSMUST00000121878 258 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm15534-201ENSMUST00000137642 562 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm25432-201ENSMUST00000158284 66 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Trbv10-201ENSMUST00000168322 289 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Mir6933-201ENSMUST00000184982 81 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm38221-201ENSMUST00000195146 365 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm43765-201ENSMUST00000196303 893 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm2142-201ENSMUST00000197899 589 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm5876-201ENSMUST00000203735 243 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm7093-201ENSMUST00000223004 581 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm23875-201ENSMUST00000083711 318 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.3□□□□□ -1.72
Trafd1Q3UDK1 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.29□□□□□ -1.72
Trafd1Q3UDK1 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms