Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col9a1Q05722 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col9a1Q05722 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm15951-201ENSMUST00000118377 400 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm8812-201ENSMUST00000118496 412 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm12281-201ENSMUST00000119536 298 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm12564-201ENSMUST00000119860 321 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm12936-201ENSMUST00000121439 301 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm22337-201ENSMUST00000157721 132 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Mir3078-201ENSMUST00000175231 87 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm26729-201ENSMUST00000180744 352 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm5372-201ENSMUST00000187540 409 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm5368-201ENSMUST00000189012 589 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm28266-201ENSMUST00000191410 439 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm8009-201ENSMUST00000191672 436 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm37380-201ENSMUST00000193752 397 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm18442-201ENSMUST00000220925 639 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 AC140477.1-201ENSMUST00000222354 246 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm2840-201ENSMUST00000048361 411 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm25801-201ENSMUST00000082638 106 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm26128-201ENSMUST00000083170 110 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm24924-201ENSMUST00000084007 164 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.65□□□□□ -1.34
Col9a1Q05722 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Col9a1Q05722 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col9a1Q05722 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col9a1Q05722 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col9a1Q05722 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.65□□□□□ -1.35
Col9a1Q05722 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.65□□□□□ -1.35
Col9a1Q05722 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.65□□□□□ -1.35
Col9a1Q05722 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col9a1Q05722 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.65□□□□□ -1.35
Col9a1Q05722 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col9a1Q05722 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.64□□□□□ -1.35
Col9a1Q05722 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm14614-201ENSMUST00000119873 384 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm5384-201ENSMUST00000120313 463 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm11343-201ENSMUST00000120579 599 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm22598-201ENSMUST00000157600 127 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm25374-201ENSMUST00000158158 101 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm24731-201ENSMUST00000158227 131 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm18343-201ENSMUST00000172802 604 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm4845-201ENSMUST00000179202 562 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm44016-201ENSMUST00000203463 164 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.64□□□□□ -1.35
Col9a1Q05722 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Col9a1Q05722 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col9a1Q05722 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.64□□□□□ -1.35
Col9a1Q05722 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms