Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm13193-201ENSMUST00000117275 225 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm14001-201ENSMUST00000118847 247 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm15014-201ENSMUST00000120742 258 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm12293-201ENSMUST00000121898 590 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm14162-201ENSMUST00000121985 601 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm25294-201ENSMUST00000122791 104 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm22675-201ENSMUST00000158430 104 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm22361-201ENSMUST00000158435 176 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm9006-201ENSMUST00000165520 841 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm20674-201ENSMUST00000177452 369 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm27428-201ENSMUST00000184289 110 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm10193-201ENSMUST00000188288 231 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm37193-201ENSMUST00000193087 513 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm43655-201ENSMUST00000197367 222 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm44403-201ENSMUST00000198554 129 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm44901-201ENSMUST00000208157 3977 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm9685-201ENSMUST00000211275 538 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 AC154328.1-201ENSMUST00000225875 307 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Mir449a-201ENSMUST00000083641 91 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Col8a1Q00780 AC121960.2-201ENSMUST00000227349 3446 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm12880-201ENSMUST00000120652 494 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm12876-201ENSMUST00000120975 408 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm15141-201ENSMUST00000121860 729 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm6081-201ENSMUST00000134472 489 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm3141-201ENSMUST00000168726 499 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm17907-201ENSMUST00000173150 710 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC4.92□□□□□ -1.62
Col8a1Q00780 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm43652-201ENSMUST00000196219 675 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm8458-201ENSMUST00000196658 819 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm6543-201ENSMUST00000197353 808 ntBASIC4.92□□□□□ -1.62
Col8a1Q00780 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms