Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm11445-201ENSMUST00000119101 532 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm15387-201ENSMUST00000120421 648 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm12693-201ENSMUST00000121965 483 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm25989-201ENSMUST00000158761 133 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm20454-201ENSMUST00000172713 221 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm23144-201ENSMUST00000180226 107 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm24306-201ENSMUST00000180229 79 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm8941-201ENSMUST00000181451 899 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm37746-201ENSMUST00000193249 198 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.34□□□□□ -1.55
GdnfP48540 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm5842-201ENSMUST00000195073 622 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm32158-201ENSMUST00000200135 404 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm44431-201ENSMUST00000203500 413 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
GdnfP48540 Gm7351-201ENSMUST00000210745 580 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GdnfP48540 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GdnfP48540 Gm6436-201ENSMUST00000077163 451 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm26225-201ENSMUST00000082508 135 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm26206-201ENSMUST00000082908 110 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Mir3068-201ENSMUST00000083004 136 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm5518-201ENSMUST00000084171 648 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GdnfP48540 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.34□□□□□ -1.55
GdnfP48540 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GdnfP48540 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
GdnfP48540 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GdnfP48540 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GdnfP48540 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
GdnfP48540 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
GdnfP48540 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GdnfP48540 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
GdnfP48540 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.33□□□□□ -1.56
GdnfP48540 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
GdnfP48540 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GdnfP48540 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
GdnfP48540 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Gm11577-201ENSMUST00000118030 737 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm15216-201ENSMUST00000118058 277 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm8475-201ENSMUST00000118211 526 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm13510-201ENSMUST00000118659 429 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm15106-201ENSMUST00000119691 821 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm5060-201ENSMUST00000120072 599 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm5405-201ENSMUST00000120478 609 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.33□□□□□ -1.56
GdnfP48540 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm11197-201ENSMUST00000145158 839 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm23545-201ENSMUST00000158205 104 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Gm16298-201ENSMUST00000161107 420 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm23162-201ENSMUST00000175081 121 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm25244-201ENSMUST00000178089 132 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm27037-201ENSMUST00000182270 960 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm27636-201ENSMUST00000184528 122 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm27601-201ENSMUST00000184794 127 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Gm28666-201ENSMUST00000186649 274 ntBASIC5.33□□□□□ -1.56
GdnfP48540 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GdnfP48540 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.33□□□□□ -1.56
GdnfP48540 Gm18600-201ENSMUST00000207205 505 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms