Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.21□□□□□ -1.73
HttP42859 Mir6938-201ENSMUST00000184173 63 ntBASIC4.21□□□□□ -1.73
HttP42859 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.21□□□□□ -1.73
HttP42859 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.21□□□□□ -1.73
HttP42859 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.21□□□□□ -1.73
HttP42859 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.21□□□□□ -1.73
HttP42859 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
HttP42859 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HttP42859 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
HttP42859 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
HttP42859 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HttP42859 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HttP42859 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
HttP42859 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.21□□□□□ -1.74
HttP42859 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HttP42859 Gm14534-201ENSMUST00000120045 357 ntBASIC4.21□□□□□ -1.74
HttP42859 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.21□□□□□ -1.74
HttP42859 AF357428-201ENSMUST00000083815 69 ntBASIC4.21□□□□□ -1.74
HttP42859 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HttP42859 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HttP42859 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HttP42859 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
HttP42859 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.21□□□□□ -1.74
HttP42859 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HttP42859 Dcdc5-202ENSMUST00000122388 4957 ntBASIC4.21□□□□□ -1.74
HttP42859 Gm8840-201ENSMUST00000122454 386 ntBASIC4.21□□□□□ -1.74
HttP42859 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.21□□□□□ -1.74
HttP42859 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.21□□□□□ -1.74
HttP42859 Mir34b-201ENSMUST00000083558 84 ntBASIC4.21□□□□□ -1.74
HttP42859 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HttP42859 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HttP42859 Gm24318-201ENSMUST00000104490 131 ntBASIC4.2□□□□□ -1.74
HttP42859 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm11600-201ENSMUST00000119592 240 ntBASIC4.2□□□□□ -1.74
HttP42859 Gm8757-201ENSMUST00000119660 372 ntBASIC4.2□□□□□ -1.74
HttP42859 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.2□□□□□ -1.74
HttP42859 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.2□□□□□ -1.74
HttP42859 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.2□□□□□ -1.74
HttP42859 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC4.2□□□□□ -1.74
HttP42859 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Gm25295-201ENSMUST00000122794 306 ntBASIC4.2□□□□□ -1.74
HttP42859 Gm25846-201ENSMUST00000158013 135 ntBASIC4.2□□□□□ -1.74
HttP42859 Gm24636-201ENSMUST00000158673 288 ntBASIC4.2□□□□□ -1.74
HttP42859 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm19739-201ENSMUST00000195941 153 ntBASIC4.2□□□□□ -1.74
HttP42859 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm43930-201ENSMUST00000203868 845 ntBASIC4.2□□□□□ -1.74
HttP42859 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.2□□□□□ -1.74
HttP42859 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.2□□□□□ -1.74
HttP42859 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC4.2□□□□□ -1.74
HttP42859 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HttP42859 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HttP42859 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.2□□□□□ -1.74
HttP42859 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
HttP42859 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
HttP42859 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HttP42859 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.19□□□□□ -1.74
HttP42859 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Gm26746-201ENSMUST00000181722 487 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HttP42859 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HttP42859 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HttP42859 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Gm23766-201ENSMUST00000103894 80 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm12683-201ENSMUST00000117528 415 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm14975-201ENSMUST00000118741 664 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.19□□□□□ -1.74
HttP42859 Gm5258-201ENSMUST00000165437 327 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC4.19□□□□□ -1.74
HttP42859 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.19□□□□□ -1.74
HttP42859 Gm5829-201ENSMUST00000191383 351 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.19□□□□□ -1.74
HttP42859 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.19□□□□□ -1.74
HttP42859 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.19□□□□□ -1.74
HttP42859 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms