Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cxcl12P40224 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cxcl12P40224 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cxcl12P40224 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cxcl12P40224 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.4□□□□□ -1.71
Cxcl12P40224 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cxcl12P40224 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.4□□□□□ -1.71
Cxcl12P40224 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cxcl12P40224 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm22497-201ENSMUST00000104499 131 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm6027-201ENSMUST00000121467 756 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm15885-201ENSMUST00000122114 388 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.39□□□□□ -1.71
Cxcl12P40224 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm25667-201ENSMUST00000157701 275 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm28923-201ENSMUST00000187755 322 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Trbv28-201ENSMUST00000192804 264 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm43424-201ENSMUST00000200484 253 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm44611-201ENSMUST00000207507 355 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm23443-201ENSMUST00000082916 128 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Cxcl12P40224 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.39□□□□□ -1.71
Cxcl12P40224 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cxcl12P40224 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm11398-201ENSMUST00000120330 320 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm25714-201ENSMUST00000158626 296 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm21803-201ENSMUST00000188897 693 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm29664-201ENSMUST00000191125 463 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm18403-201ENSMUST00000192907 529 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm35702-201ENSMUST00000198653 511 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm44389-201ENSMUST00000203795 182 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm20997-201ENSMUST00000205148 231 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm17829-201ENSMUST00000219782 344 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm18116-201ENSMUST00000220920 537 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Cxcl12P40224 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.38□□□□□ -1.71
Cxcl12P40224 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cxcl12P40224 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Cxcl12P40224 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cxcl12P40224 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
Cxcl12P40224 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cxcl12P40224 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.37□□□□□ -1.71
Cxcl12P40224 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.37□□□□□ -1.71
Cxcl12P40224 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cxcl12P40224 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cxcl12P40224 Gm15268-201ENSMUST00000118845 352 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms