Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 Gm44708-201ENSMUST00000205580 2237 ntBASIC6.22□□□□□ -1.41
RaraP11416 AC164297.6-201ENSMUST00000224643 1568 ntBASIC6.22□□□□□ -1.41
RaraP11416 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RaraP11416 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RaraP11416 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RaraP11416 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
RaraP11416 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.21□□□□□ -1.41
RaraP11416 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
RaraP11416 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.21□□□□□ -1.41
RaraP11416 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RaraP11416 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.21□□□□□ -1.42
RaraP11416 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Gm26396-201ENSMUST00000104093 132 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm11561-201ENSMUST00000117429 417 ntBASIC6.21□□□□□ -1.42
RaraP11416 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm12095-201ENSMUST00000121962 816 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm13745-201ENSMUST00000121994 527 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Gm16254-201ENSMUST00000131528 730 ntBASIC6.21□□□□□ -1.42
RaraP11416 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm24179-201ENSMUST00000158925 127 ntBASIC6.21□□□□□ -1.42
RaraP11416 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Gm25670-201ENSMUST00000178423 107 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm26239-201ENSMUST00000178842 107 ntBASIC6.21□□□□□ -1.42
RaraP11416 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Gm24267-201ENSMUST00000179841 107 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm4832-201ENSMUST00000182679 399 ntBASIC6.21□□□□□ -1.42
RaraP11416 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm44463-201ENSMUST00000198895 137 ntBASIC6.21□□□□□ -1.42
RaraP11416 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.21□□□□□ -1.42
RaraP11416 Gm17890-201ENSMUST00000221419 757 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm18413-201ENSMUST00000221573 655 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm8231-201ENSMUST00000221617 783 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.21□□□□□ -1.42
RaraP11416 AC139294.1-201ENSMUST00000226708 571 ntBASIC6.21□□□□□ -1.42
RaraP11416 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RaraP11416 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm24292-201ENSMUST00000082888 107 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm24446-201ENSMUST00000083982 156 ntBASIC6.21□□□□□ -1.42
RaraP11416 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.21□□□□□ -1.42
RaraP11416 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.21□□□□□ -1.42
RaraP11416 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RaraP11416 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RaraP11416 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.21□□□□□ -1.42
RaraP11416 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
RaraP11416 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.2□□□□□ -1.42
RaraP11416 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RaraP11416 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.2□□□□□ -1.42
RaraP11416 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
RaraP11416 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RaraP11416 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
RaraP11416 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RaraP11416 Gm38388-201ENSMUST00000195569 1430 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm25213-201ENSMUST00000102388 113 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm11270-201ENSMUST00000117685 471 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm9059-201ENSMUST00000118319 183 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm5405-201ENSMUST00000120478 609 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm11879-201ENSMUST00000121885 702 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm13363-201ENSMUST00000122008 522 ntBASIC6.2□□□□□ -1.42
RaraP11416 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.2□□□□□ -1.42
RaraP11416 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm17048-201ENSMUST00000179266 847 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm27037-201ENSMUST00000182270 960 ntBASIC6.2□□□□□ -1.42
RaraP11416 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm28058-201ENSMUST00000186421 264 ntBASIC6.2□□□□□ -1.42
RaraP11416 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RaraP11416 Gm6631-201ENSMUST00000193699 559 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm43652-201ENSMUST00000196219 675 ntBASIC6.2□□□□□ -1.42
RaraP11416 Gm43541-201ENSMUST00000197208 581 ntBASIC6.2□□□□□ -1.42
RaraP11416 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.2□□□□□ -1.42
RaraP11416 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms