Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm24790-201ENSMUST00000104285 132 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm24888-201ENSMUST00000104387 130 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm15158-201ENSMUST00000120577 570 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm14287-201ENSMUST00000121060 117 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm14775-201ENSMUST00000122089 310 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm24689-201ENSMUST00000157760 104 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm25333-201ENSMUST00000158035 246 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm26211-201ENSMUST00000158578 129 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm16569-201ENSMUST00000160526 314 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm4222-201ENSMUST00000165784 470 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm26970-201ENSMUST00000182990 964 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm27295-201ENSMUST00000184264 153 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm27601-201ENSMUST00000184794 127 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm38044-201ENSMUST00000192964 487 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm42673-201ENSMUST00000202676 337 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm4032-201ENSMUST00000210886 487 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Robo2-210ENSMUST00000226478 8059 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Hoxd3P09027 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.17□□□□□ -1.58
Hoxd3P09027 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm10555-201ENSMUST00000193178 1791 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm23424-201ENSMUST00000103889 110 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm15526-201ENSMUST00000112504 204 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm13930-201ENSMUST00000118569 368 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm14796-201ENSMUST00000121216 959 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm11200-201ENSMUST00000121698 448 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm22223-201ENSMUST00000157360 125 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm26412-201ENSMUST00000157666 55 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm25244-201ENSMUST00000178089 132 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm27521-201ENSMUST00000184022 64 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm28023-201ENSMUST00000184556 60 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm27825-201ENSMUST00000184586 60 ntBASIC5.16□□□□□ -1.58
Hoxd3P09027 Gm27747-201ENSMUST00000184707 85 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms