Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col3a1P08121 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col3a1P08121 Mir132-201ENSMUST00000083603 66 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col3a1P08121 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
Col3a1P08121 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm14473-201ENSMUST00000122269 557 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.12□□□□□ -1.59
Col3a1P08121 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm28830-201ENSMUST00000188192 213 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm6140-201ENSMUST00000192494 966 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm9931-201ENSMUST00000193584 1185 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.12□□□□□ -1.59
Col3a1P08121 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.12□□□□□ -1.59
Col3a1P08121 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm44830-201ENSMUST00000207667 584 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm44543-201ENSMUST00000209136 396 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Col3a1P08121 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col3a1P08121 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col3a1P08121 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col3a1P08121 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.12□□□□□ -1.59
Col3a1P08121 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.11□□□□□ -1.59
Col3a1P08121 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm12311-201ENSMUST00000118803 374 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm25104-201ENSMUST00000122476 163 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm23816-201ENSMUST00000179617 132 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm5066-201ENSMUST00000188479 822 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm18547-201ENSMUST00000192439 811 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm38283-201ENSMUST00000193041 695 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm43649-201ENSMUST00000196596 391 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm42428-201ENSMUST00000198677 302 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Gm43730-201ENSMUST00000199863 372 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col3a1P08121 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.11□□□□□ -1.59
Col3a1P08121 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col3a1P08121 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col3a1P08121 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm11406-201ENSMUST00000117418 484 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm14365-201ENSMUST00000117535 587 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm12173-201ENSMUST00000117622 273 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm13092-201ENSMUST00000136346 260 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm24730-201ENSMUST00000158228 117 ntBASIC5.1□□□□□ -1.59
Col3a1P08121 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.1□□□□□ -1.59
Col3a1P08121 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.1□□□□□ -1.59
Col3a1P08121 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col3a1P08121 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms