Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm23677-201ENSMUST00000083156 104 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Synpr-207ENSMUST00000223583 3362 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Mir466j-201ENSMUST00000116876 122 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm4342-201ENSMUST00000118982 367 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm7421-201ENSMUST00000119298 639 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm5060-201ENSMUST00000120072 599 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm15194-201ENSMUST00000120453 434 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm7365-201ENSMUST00000120877 639 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm12650-201ENSMUST00000121966 258 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm7840-201ENSMUST00000122086 533 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm23327-201ENSMUST00000157420 78 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm24395-201ENSMUST00000158139 125 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm23179-201ENSMUST00000158693 304 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm4617-201ENSMUST00000178993 331 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm28471-201ENSMUST00000185994 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm28598-201ENSMUST00000186490 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm29268-201ENSMUST00000188669 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm29036-201ENSMUST00000189967 877 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm29218-205ENSMUST00000190846 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm28978-201ENSMUST00000191120 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm37172-201ENSMUST00000191926 615 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.38□□□□□ -1.87
Hmgb3O54879 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm43371-201ENSMUST00000202838 1031 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm8132-201ENSMUST00000204938 640 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hmgb3O54879 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm23464-201ENSMUST00000083145 147 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Hmgb3O54879 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hmgb3O54879 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.38□□□□□ -1.87
Hmgb3O54879 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm15933-201ENSMUST00000117215 616 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm11633-201ENSMUST00000118176 444 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm13887-201ENSMUST00000119009 344 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm12226-201ENSMUST00000144172 876 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm24217-201ENSMUST00000158260 133 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm26171-201ENSMUST00000158422 131 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm36939-201ENSMUST00000194889 439 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm21006-201ENSMUST00000196930 667 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm8929-201ENSMUST00000197781 1132 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm44023-201ENSMUST00000203710 469 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
Hmgb3O54879 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Gm19181-201ENSMUST00000218891 940 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC3.37□□□□□ -1.87
Hmgb3O54879 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hmgb3O54879 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.37□□□□□ -1.87
Hmgb3O54879 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Hmgb3O54879 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hmgb3O54879 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms