Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm11398-201ENSMUST00000120330 320 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm45845-201ENSMUST00000207326 582 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm8745-201ENSMUST00000207846 782 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm37733-201ENSMUST00000195478 2962 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm24048-201ENSMUST00000102411 106 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm24739-201ENSMUST00000158855 292 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm16026-202ENSMUST00000159695 772 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm27158-201ENSMUST00000183813 238 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm29598-201ENSMUST00000188996 588 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm43093-201ENSMUST00000202439 1213 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a4A2AX52 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col6a4A2AX52 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.45□□□□□ -1.86
Col6a4A2AX52 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm25272-201ENSMUST00000104293 128 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm23319-201ENSMUST00000104467 131 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm23667-201ENSMUST00000157466 120 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm42451-201ENSMUST00000197410 244 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm23925-201ENSMUST00000082471 132 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm10704-201ENSMUST00000098952 730 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm43781-201ENSMUST00000197634 2681 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Mir879-201ENSMUST00000104703 76 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm7834-201ENSMUST00000117560 437 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm14603-201ENSMUST00000121275 448 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm28396-201ENSMUST00000190309 379 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm28655-201ENSMUST00000191538 692 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm44261-201ENSMUST00000203337 209 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm43282-201ENSMUST00000201848 2157 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.44□□□□□ -1.86
Col6a4A2AX52 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a4A2AX52 Gm14299-201ENSMUST00000117586 397 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm11742-201ENSMUST00000119903 233 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm16378-201ENSMUST00000179168 342 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm43209-201ENSMUST00000198949 1588 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.43□□□□□ -1.86
Col6a4A2AX52 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms