Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.21□□□□□ -1.9
Trav6n-6A0A075B6B2 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm12520-201ENSMUST00000117493 316 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm15553-201ENSMUST00000118757 430 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm12287-201ENSMUST00000119770 707 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm14229-201ENSMUST00000121178 850 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm24113-201ENSMUST00000157477 276 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm26312-201ENSMUST00000157769 165 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm26352-201ENSMUST00000158223 125 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm21850-201ENSMUST00000179792 359 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm28974-201ENSMUST00000187893 231 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm29138-201ENSMUST00000191444 348 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm37961-201ENSMUST00000192729 299 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm38046-201ENSMUST00000192733 550 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm4290-201ENSMUST00000206897 814 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm18899-201ENSMUST00000217663 546 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm24031-201ENSMUST00000083930 131 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.2□□□□□ -1.9
Trav6n-6A0A075B6B2 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm13607-201ENSMUST00000117875 539 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm14885-201ENSMUST00000117969 496 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm12988-201ENSMUST00000119054 478 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm11325-201ENSMUST00000119967 469 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm11510-201ENSMUST00000120278 347 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm5123-201ENSMUST00000121905 837 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm5755-201ENSMUST00000152394 837 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm26355-201ENSMUST00000158220 105 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Dlx6os1-204ENSMUST00000184182 146 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm27387-201ENSMUST00000184583 116 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm18181-201ENSMUST00000190670 736 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.19□□□□□ -1.9
Trav6n-6A0A075B6B2 Gm45735-201ENSMUST00000212779 319 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms