Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm12328-201ENSMUST00000118611 197 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm12507-201ENSMUST00000119155 415 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm11262-201ENSMUST00000119326 833 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm23465-201ENSMUST00000157134 262 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm23906-201ENSMUST00000157573 128 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm23501-201ENSMUST00000157744 256 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm25603-201ENSMUST00000158361 105 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm22156-201ENSMUST00000158409 141 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm22361-201ENSMUST00000158435 176 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm22923-201ENSMUST00000174952 110 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm8221-201ENSMUST00000178052 564 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm8604-201ENSMUST00000183150 965 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm27564-201ENSMUST00000185196 96 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm28190-201ENSMUST00000189766 722 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm19030-201ENSMUST00000194947 552 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm44376-201ENSMUST00000197570 128 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm19908-201ENSMUST00000204684 391 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm43922-201ENSMUST00000205071 328 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm7093-201ENSMUST00000223004 581 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm15426-201ENSMUST00000117823 556 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm11877-201ENSMUST00000118921 852 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm15603-201ENSMUST00000119252 492 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm14067-201ENSMUST00000119340 314 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm11448-201ENSMUST00000120427 450 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm25278-201ENSMUST00000157267 120 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm25665-201ENSMUST00000157695 110 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Mir3090-201ENSMUST00000175597 87 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Mir6410-201ENSMUST00000184204 104 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm43730-201ENSMUST00000199863 372 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm44946-201ENSMUST00000208425 572 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb2S4R1M3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm26367-201ENSMUST00000104165 132 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm10552-201ENSMUST00000113396 372 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm11432-201ENSMUST00000117334 231 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm14714-201ENSMUST00000119743 439 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Clec2f-201ENSMUST00000121051 374 ntBASIC4.25□□□□□ -1.73
H2afb2S4R1M3 Gm12466-201ENSMUST00000121199 620 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms