Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.58□□□□□ -1.68
H2afb3S4R1G7 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H2afb3S4R1G7 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm14365-201ENSMUST00000117535 587 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm14751-201ENSMUST00000117693 222 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm11420-201ENSMUST00000120047 402 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm25176-201ENSMUST00000122640 125 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm9428-201ENSMUST00000127214 769 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm24690-201ENSMUST00000157759 97 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm7346-201ENSMUST00000169661 476 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Mir3572-201ENSMUST00000175549 86 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm18588-201ENSMUST00000177308 492 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm9457-201ENSMUST00000180176 372 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Mir8118-201ENSMUST00000183962 129 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm27636-201ENSMUST00000184528 122 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Mir7087-201ENSMUST00000184840 70 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm28353-201ENSMUST00000186482 570 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm28533-201ENSMUST00000186741 570 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm29600-201ENSMUST00000188687 377 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm9632-201ENSMUST00000195934 643 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm42542-201ENSMUST00000197978 268 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Mir142-201ENSMUST00000198092 64 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm3148-201ENSMUST00000203594 612 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm18011-201ENSMUST00000203717 565 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm5374-201ENSMUST00000222868 657 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm2645-201ENSMUST00000223516 547 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Zfp640-202ENSMUST00000224116 1562 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.57□□□□□ -1.68
H2afb3S4R1G7 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
H2afb3S4R1G7 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms