Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm38046-201ENSMUST00000192733 550 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm45610-201ENSMUST00000209227 784 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Svet1-201ENSMUST00000209370 3940 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm5754-201ENSMUST00000118774 892 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm13460-201ENSMUST00000121274 353 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm23960-201ENSMUST00000157206 131 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm22312-201ENSMUST00000158005 130 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm16114-201ENSMUST00000161930 300 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm5258-201ENSMUST00000165437 327 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm27315-201ENSMUST00000183977 154 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Mir6410-201ENSMUST00000184204 104 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm8599-201ENSMUST00000193033 457 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm36954-201ENSMUST00000195362 363 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm44952-201ENSMUST00000204443 433 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm45690-201ENSMUST00000210775 246 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm6043-201ENSMUST00000099961 492 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Trim3Q9R1R2 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm12311-201ENSMUST00000118803 374 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm15603-201ENSMUST00000119252 492 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm12564-201ENSMUST00000119860 321 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm12105-201ENSMUST00000120846 779 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm14649-201ENSMUST00000121814 324 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm23496-201ENSMUST00000157741 248 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm2389-201ENSMUST00000160487 189 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm22177-201ENSMUST00000175002 158 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim3Q9R1R2 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.23□□□□□ -1.73
Trim3Q9R1R2 Gm37636-201ENSMUST00000193583 359 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms