Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Lima1Q9ERG0 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm15752-201ENSMUST00000117427 394 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm17159-201ENSMUST00000169043 482 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm21991-201ENSMUST00000180006 508 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm27940-201ENSMUST00000184449 98 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm28614-201ENSMUST00000186483 458 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm21742-201ENSMUST00000189352 548 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm37996-201ENSMUST00000191859 367 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm28724-202ENSMUST00000194218 295 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm34224-201ENSMUST00000204606 364 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm45032-201ENSMUST00000205375 520 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm22423-201ENSMUST00000082861 184 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Lima1Q9ERG0 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm11398-201ENSMUST00000120330 320 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm11910-201ENSMUST00000121624 432 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm25655-201ENSMUST00000158465 290 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm22529-201ENSMUST00000158817 123 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm16303-201ENSMUST00000161498 390 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm23638-201ENSMUST00000175073 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm23158-201ENSMUST00000175076 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm22907-201ENSMUST00000175198 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm22625-201ENSMUST00000175382 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm22875-201ENSMUST00000175449 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm25197-201ENSMUST00000175516 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm27857-201ENSMUST00000176930 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm26268-201ENSMUST00000177685 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm23681-201ENSMUST00000178821 126 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21241-201ENSMUST00000179551 934 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm20819-201ENSMUST00000191091 925 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm20871-201ENSMUST00000191322 931 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm2622-201ENSMUST00000200018 471 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.14□□□□□ -1.75
Lima1Q9ERG0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms