Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm23554-201ENSMUST00000157818 110 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm25447-201ENSMUST00000158997 128 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm30280-201ENSMUST00000192214 262 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm43710-201ENSMUST00000199583 452 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm45789-201ENSMUST00000213038 364 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc3Q9D6Y1 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm13973-201ENSMUST00000121371 894 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm22816-201ENSMUST00000157450 117 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm24224-201ENSMUST00000158828 258 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Mir5710-201ENSMUST00000176884 69 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm26165-201ENSMUST00000083791 138 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.22□□□□□ -1.73
Ccdc3Q9D6Y1 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc3Q9D6Y1 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc3Q9D6Y1 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ccdc3Q9D6Y1 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Snora64-201ENSMUST00000104521 134 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm12719-201ENSMUST00000118859 241 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm11625-201ENSMUST00000119535 296 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm12486-201ENSMUST00000120887 541 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm25806-201ENSMUST00000122782 122 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm10444-201ENSMUST00000126708 148 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm2182-201ENSMUST00000145243 663 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Mir6537-201ENSMUST00000184150 110 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43925-201ENSMUST00000203498 206 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm5876-201ENSMUST00000203735 243 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Mir202-201ENSMUST00000083568 72 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc3Q9D6Y1 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms