Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm37576-201ENSMUST00000194228 372 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm30858-201ENSMUST00000195516 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm35212-201ENSMUST00000196672 606 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm44212-201ENSMUST00000205016 897 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm46192-201ENSMUST00000217894 326 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Mir466n-201ENSMUST00000104798 94 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm15111-201ENSMUST00000122142 878 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm8061-201ENSMUST00000122380 350 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm23225-201ENSMUST00000158121 114 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm10784-201ENSMUST00000178715 238 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm28412-201ENSMUST00000187243 177 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm37681-201ENSMUST00000193880 727 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm38234-201ENSMUST00000195204 421 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm43070-201ENSMUST00000196938 415 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm45690-201ENSMUST00000210775 246 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm45530-201ENSMUST00000211658 225 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Olfr881-201ENSMUST00000074611 948 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm24035-201ENSMUST00000082867 107 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Mir342-201ENSMUST00000083502 99 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Mir20a-201ENSMUST00000083508 107 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Mir449a-201ENSMUST00000083641 91 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.51□□□□□ -1.53
Ddx56Q9D0R4 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm12261-201ENSMUST00000117499 645 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm15803-201ENSMUST00000120118 394 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Gm25846-201ENSMUST00000158013 135 ntBASIC5.5□□□□□ -1.53
Ddx56Q9D0R4 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms