Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm22646-201ENSMUST00000175130 115 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm22395-201ENSMUST00000177427 96 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm21816-201ENSMUST00000179255 360 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm28615-201ENSMUST00000187527 482 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm29196-201ENSMUST00000189239 618 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm2691-201ENSMUST00000203205 901 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm18193-201ENSMUST00000210017 772 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Smc1aQ9CU62 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm13867-201ENSMUST00000120844 395 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm22588-201ENSMUST00000157510 140 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm16107-201ENSMUST00000162523 862 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm8221-201ENSMUST00000178052 564 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm29138-201ENSMUST00000191444 348 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm37272-201ENSMUST00000193401 488 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm44972-201ENSMUST00000206419 406 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm19181-201ENSMUST00000218891 940 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Mir215-201ENSMUST00000083628 112 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm24031-201ENSMUST00000083930 131 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Smc1aQ9CU62 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm12387-201ENSMUST00000118573 955 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm6062-201ENSMUST00000120462 631 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm13677-201ENSMUST00000120739 595 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm11350-201ENSMUST00000121436 870 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm24251-201ENSMUST00000157324 114 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm24507-201ENSMUST00000157683 134 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm3030-201ENSMUST00000163410 516 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm3339-201ENSMUST00000163462 475 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm27414-201ENSMUST00000185033 381 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm28614-201ENSMUST00000186483 458 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm37243-201ENSMUST00000193407 595 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm45474-201ENSMUST00000209471 408 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.04□□□□□ -1.6
Smc1aQ9CU62 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.03□□□□□ -1.6
Smc1aQ9CU62 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms