Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm24935-201ENSMUST00000103770 110 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm15670-201ENSMUST00000117740 447 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm14706-201ENSMUST00000117744 255 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm13501-201ENSMUST00000118477 979 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm5943-201ENSMUST00000119458 459 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm25103-201ENSMUST00000122671 318 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm23046-201ENSMUST00000158369 284 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Scarna6-201ENSMUST00000158656 265 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm28788-201ENSMUST00000189717 375 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm29558-201ENSMUST00000190134 375 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm43794-201ENSMUST00000200971 692 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC124542.1-201ENSMUST00000205588 908 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm7639-201ENSMUST00000212608 484 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm4263-202ENSMUST00000221392 667 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC132237.2-201ENSMUST00000221702 1209 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.82□□□□□ -1.48
Brf1Q8CFK2 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm16106-201ENSMUST00000119187 294 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm12880-201ENSMUST00000120652 494 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm22870-201ENSMUST00000157501 112 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm3531-201ENSMUST00000162698 489 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm4134-201ENSMUST00000173244 563 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm5473-201ENSMUST00000179326 642 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm29073-201ENSMUST00000185563 664 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm4412-201ENSMUST00000186660 433 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm29165-201ENSMUST00000190655 664 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm29211-201ENSMUST00000191470 664 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm37288-201ENSMUST00000193963 334 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm23623-201ENSMUST00000082461 107 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Gm25818-201ENSMUST00000083282 164 ntBASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Brf1Q8CFK2 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms