Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Mir6994-201ENSMUST00000198985 73 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm19134-201ENSMUST00000221203 487 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm6988-201ENSMUST00000222676 375 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.3□□□□□ -1.72
Ccdc28aQ8CEI3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26067-201ENSMUST00000103789 110 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm15994-201ENSMUST00000118029 402 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm27805-201ENSMUST00000184513 79 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm29475-201ENSMUST00000190767 312 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43974-201ENSMUST00000205080 684 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm45031-201ENSMUST00000206800 288 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm26449-201ENSMUST00000082452 104 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Gm23928-201ENSMUST00000082469 145 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28aQ8CEI3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm15180-201ENSMUST00000117745 492 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm16179-201ENSMUST00000120685 373 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm13808-201ENSMUST00000121353 184 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm23743-201ENSMUST00000157389 274 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm25908-201ENSMUST00000157624 98 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm17155-201ENSMUST00000165969 473 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm23215-201ENSMUST00000178153 121 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm44184-201ENSMUST00000204290 132 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm33626-201ENSMUST00000206790 828 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm46998-201ENSMUST00000221444 330 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28aQ8CEI3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Ccdc28aQ8CEI3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm15333-201ENSMUST00000118825 364 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm11877-201ENSMUST00000118921 852 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm11366-201ENSMUST00000119279 429 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm13865-201ENSMUST00000120957 865 ntBASIC4.27□□□□□ -1.73
Ccdc28aQ8CEI3 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms