Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Mir28a-201ENSMUST00000083560 86 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trub1Q8C0D0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm22472-201ENSMUST00000104115 134 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm24608-201ENSMUST00000104381 136 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Snora64-201ENSMUST00000104521 134 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm15916-201ENSMUST00000118355 736 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm14930-201ENSMUST00000118864 652 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm23789-201ENSMUST00000122536 301 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm27762-201ENSMUST00000183417 109 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm29563-201ENSMUST00000187249 496 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm37088-201ENSMUST00000193887 406 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm4045-201ENSMUST00000204076 310 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trub1Q8C0D0 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm14539-201ENSMUST00000117527 174 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm14957-201ENSMUST00000121069 817 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm26036-201ENSMUST00000158149 144 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Mir1947-201ENSMUST00000158235 85 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm27875-201ENSMUST00000184425 123 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Trub1Q8C0D0 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm22272-201ENSMUST00000104039 134 ntBASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm23499-201ENSMUST00000157736 268 ntBASIC4.22□□□□□ -1.73
Trub1Q8C0D0 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms