Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15799-201ENSMUST00000120899 289 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm14845-201ENSMUST00000121259 306 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm24850-201ENSMUST00000158029 119 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm7241-201ENSMUST00000159853 357 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm28660-201ENSMUST00000186496 253 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Usp47Q8BY87 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp47Q8BY87 Gm37300-201ENSMUST00000193327 280 ntBASIC5.79□□□□□ -1.48
Usp47Q8BY87 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Usp47Q8BY87 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp47Q8BY87 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp47Q8BY87 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp47Q8BY87 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm24403-201ENSMUST00000104616 130 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm11212-201ENSMUST00000118337 618 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm16566-201ENSMUST00000160387 910 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm23816-201ENSMUST00000179617 132 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm44099-201ENSMUST00000203299 112 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Mir370-201ENSMUST00000083499 79 ntBASIC5.78□□□□□ -1.48
Usp47Q8BY87 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp47Q8BY87 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp47Q8BY87 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
Usp47Q8BY87 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm11692-201ENSMUST00000122121 902 ntBASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.77□□□□□ -1.49
Usp47Q8BY87 Gm19774-201ENSMUST00000190667 114 ntBASIC5.77□□□□□ -1.49
Usp47Q8BY87 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.77□□□□□ -1.49
Usp47Q8BY87 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp47Q8BY87 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm24281-201ENSMUST00000104234 136 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm14299-201ENSMUST00000117586 397 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm14714-201ENSMUST00000119743 439 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm14564-201ENSMUST00000122159 294 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm2862-201ENSMUST00000161524 328 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm8296-201ENSMUST00000185597 524 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm21617-201ENSMUST00000188297 691 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm43044-201ENSMUST00000198091 379 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm44712-201ENSMUST00000206250 1076 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Usp47Q8BY87 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.76□□□□□ -1.49
Usp47Q8BY87 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp47Q8BY87 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm14605-201ENSMUST00000120599 268 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm11645-201ENSMUST00000121589 649 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm29588-201ENSMUST00000185738 298 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm43028-201ENSMUST00000202561 481 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Gm8035-201ENSMUST00000204625 687 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.75□□□□□ -1.49
Usp47Q8BY87 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.75□□□□□ -1.49
Usp47Q8BY87 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms