Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm14086-201ENSMUST00000117152 173 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm15854-201ENSMUST00000118879 808 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm13555-201ENSMUST00000121668 319 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm25907-201ENSMUST00000158486 125 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm2855-201ENSMUST00000166765 456 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm20674-201ENSMUST00000177452 369 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm15143-201ENSMUST00000178180 714 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm37501-201ENSMUST00000192830 691 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC155305.1-201ENSMUST00000222207 319 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm7822-201ENSMUST00000222433 581 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ubfd1Q78JW9 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm15357-201ENSMUST00000119160 285 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm15157-201ENSMUST00000121852 702 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm22870-201ENSMUST00000157501 112 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm23385-201ENSMUST00000158592 295 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm3531-201ENSMUST00000162698 489 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm3102-201ENSMUST00000164236 489 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm17154-201ENSMUST00000165748 431 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm10087-201ENSMUST00000167650 330 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm17064-201ENSMUST00000167690 452 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Rab26os-201ENSMUST00000176215 477 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm27659-201ENSMUST00000183472 98 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm27820-201ENSMUST00000183628 175 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Mir6416-201ENSMUST00000183664 117 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm35212-201ENSMUST00000196672 606 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm18729-201ENSMUST00000217230 621 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm8681-201ENSMUST00000219115 618 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ubfd1Q78JW9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms