Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Trbv22-201ENSMUST00000191697 291 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm38030-201ENSMUST00000192376 475 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Mir6516-201ENSMUST00000196236 110 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm43203-201ENSMUST00000200130 558 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm43233-201ENSMUST00000200491 616 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm5735-201ENSMUST00000207053 167 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm45727-201ENSMUST00000212886 572 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm22155-201ENSMUST00000083836 162 ntBASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Rnf220Q6PDX6 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm25345-201ENSMUST00000104505 133 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm16431-201ENSMUST00000117454 431 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm11393-201ENSMUST00000118019 288 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm11268-201ENSMUST00000118347 267 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm13156-201ENSMUST00000118348 321 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm12433-201ENSMUST00000119659 255 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm6591-201ENSMUST00000121063 434 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm11879-201ENSMUST00000121885 702 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm12293-201ENSMUST00000121898 590 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms