Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.28□□□□□ -1.56
Ift88Q61371 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ift88Q61371 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ift88Q61371 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm13250-201ENSMUST00000117209 753 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gm14103-201ENSMUST00000119075 366 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gm13488-201ENSMUST00000120419 179 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gm15166-201ENSMUST00000120790 385 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm16566-201ENSMUST00000160387 910 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Ift88Q61371 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm21894-201ENSMUST00000179631 546 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.27□□□□□ -1.57
Ift88Q61371 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm4052-201ENSMUST00000220890 451 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 AC168059.2-201ENSMUST00000224473 333 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 AC108945.1-201ENSMUST00000226477 94 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm25821-201ENSMUST00000093657 133 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ift88Q61371 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ift88Q61371 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Ift88Q61371 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
Ift88Q61371 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.26□□□□□ -1.57
Ift88Q61371 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ift88Q61371 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ift88Q61371 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ift88Q61371 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm24230-201ENSMUST00000104313 129 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.26□□□□□ -1.57
Ift88Q61371 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm7421-201ENSMUST00000119298 639 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm7365-201ENSMUST00000120877 639 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm13131-201ENSMUST00000122228 321 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm14905-201ENSMUST00000122351 639 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm5924-201ENSMUST00000132554 871 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm11197-201ENSMUST00000145158 839 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm22940-201ENSMUST00000158560 155 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm20657-201ENSMUST00000177079 515 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm26933-201ENSMUST00000182320 827 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm27960-201ENSMUST00000183445 184 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Mir6238-201ENSMUST00000184140 129 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm27492-201ENSMUST00000185194 187 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm27964-201ENSMUST00000185195 62 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm36998-201ENSMUST00000193205 704 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.26□□□□□ -1.57
Ift88Q61371 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ift88Q61371 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.26□□□□□ -1.57
Ift88Q61371 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms