Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm19125-201ENSMUST00000188408 1383 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm37474-201ENSMUST00000194812 1814 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 AC164107.1-202ENSMUST00000228953 1816 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm12230-201ENSMUST00000118301 454 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Mup-ps19-201ENSMUST00000120390 519 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm8039-201ENSMUST00000204758 712 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm44134-202ENSMUST00000204777 545 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm10988-201ENSMUST00000209150 1088 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm8785-201ENSMUST00000220259 487 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm18442-201ENSMUST00000220925 639 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Mir325-201ENSMUST00000083491 98 ntBASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim41Q5NCC3 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm24935-201ENSMUST00000103770 110 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm12115-201ENSMUST00000119969 447 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm24909-201ENSMUST00000157290 280 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm22563-201ENSMUST00000157333 269 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm3084-201ENSMUST00000169967 598 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm25939-201ENSMUST00000179876 191 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm27308-201ENSMUST00000184807 233 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm44068-201ENSMUST00000204049 2128 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm5176-202ENSMUST00000220267 583 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Gm31849-201ENSMUST00000220306 375 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 AC170086.1-201ENSMUST00000225190 497 ntBASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim41Q5NCC3 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim41Q5NCC3 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Trim41Q5NCC3 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trim41Q5NCC3 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trim41Q5NCC3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trim41Q5NCC3 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm37470-201ENSMUST00000193378 2798 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm26318-201ENSMUST00000176507 96 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm21399-201ENSMUST00000180210 597 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm29650-201ENSMUST00000188485 742 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm2676-201ENSMUST00000207279 606 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 CT025579.3-201ENSMUST00000224543 451 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 AC154738.7-201ENSMUST00000228606 579 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Snord42a-201ENSMUST00000082606 65 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm22997-201ENSMUST00000082845 107 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm23502-201ENSMUST00000083902 145 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm24446-201ENSMUST00000083982 156 ntBASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Trim41Q5NCC3 Gm18852-201ENSMUST00000184149 3593 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm43627-201ENSMUST00000197119 2299 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm42989-201ENSMUST00000200646 2306 ntBASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trim41Q5NCC3 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms