Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trim40Q3UWA4 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm2288-201ENSMUST00000118560 638 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm15553-201ENSMUST00000118757 430 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm12564-201ENSMUST00000119860 321 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm14991-201ENSMUST00000119913 598 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm14977-201ENSMUST00000121626 812 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm11804-201ENSMUST00000121663 468 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm23534-201ENSMUST00000157539 97 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm24395-201ENSMUST00000158139 125 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm22111-201ENSMUST00000178010 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm23687-201ENSMUST00000178664 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm24566-201ENSMUST00000179286 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm23305-201ENSMUST00000179342 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm26389-201ENSMUST00000179819 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm22130-201ENSMUST00000179979 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm22393-201ENSMUST00000180153 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm25085-201ENSMUST00000180298 79 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm29534-201ENSMUST00000187328 382 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm38268-201ENSMUST00000195813 193 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm42437-201ENSMUST00000197263 923 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm19908-201ENSMUST00000204684 391 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm44543-201ENSMUST00000209136 396 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm33601-201ENSMUST00000210001 961 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 BC023105-201ENSMUST00000073997 1227 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm23514-201ENSMUST00000082827 130 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.21□□□□□ -1.74
Trim40Q3UWA4 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim40Q3UWA4 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm11822-201ENSMUST00000119177 415 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm25660-201ENSMUST00000158470 104 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm8221-201ENSMUST00000178052 564 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm28724-202ENSMUST00000194218 295 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm38216-201ENSMUST00000194872 1214 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm44402-201ENSMUST00000203677 238 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm19256-201ENSMUST00000218550 231 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms