Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm19366-201ENSMUST00000206996 156 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm45651-201ENSMUST00000210857 335 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Trafd1Q3UDK1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Trafd1Q3UDK1 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trafd1Q3UDK1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm15752-201ENSMUST00000117427 394 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm23467-201ENSMUST00000157127 159 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm22600-201ENSMUST00000157598 269 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm23501-201ENSMUST00000157744 256 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm15796-201ENSMUST00000162135 204 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm20701-201ENSMUST00000176082 347 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Mir7074-201ENSMUST00000183884 63 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm27611-201ENSMUST00000184690 108 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm27286-201ENSMUST00000184934 179 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm18181-201ENSMUST00000190670 736 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm43974-201ENSMUST00000205080 684 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm33626-201ENSMUST00000206790 828 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm6195-201ENSMUST00000063059 357 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.33□□□□□ -1.72
Trafd1Q3UDK1 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm15779-201ENSMUST00000117470 412 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm12340-201ENSMUST00000121617 462 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Mir3104-201ENSMUST00000174911 63 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm24561-201ENSMUST00000175182 95 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm5372-201ENSMUST00000187540 409 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm8599-201ENSMUST00000193033 457 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm37670-201ENSMUST00000193622 229 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm44232-201ENSMUST00000204537 225 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm44002-201ENSMUST00000205134 594 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm44765-201ENSMUST00000206927 601 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Gm46190-201ENSMUST00000219650 427 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 AC165437.1-201ENSMUST00000228640 536 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Mecom-201ENSMUST00000061088 348 ntBASIC4.32□□□□□ -1.72
Trafd1Q3UDK1 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms