Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28194-201ENSMUST00000187412 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28886-202ENSMUST00000187889 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29650-201ENSMUST00000188485 742 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28554-202ENSMUST00000189175 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29213-202ENSMUST00000189703 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28851-202ENSMUST00000189757 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28461-201ENSMUST00000190023 484 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Trbv8-201ENSMUST00000194020 285 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm37774-201ENSMUST00000194401 245 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm9227-201ENSMUST00000194733 566 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm33354-201ENSMUST00000195448 906 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm43510-201ENSMUST00000197922 353 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm35648-201ENSMUST00000202304 475 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm7692-201ENSMUST00000213534 409 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm7887-201ENSMUST00000056948 537 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Mir421-201ENSMUST00000083575 76 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm12057-201ENSMUST00000117244 1427 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 AC162936.1-201ENSMUST00000223676 2368 ntBASIC4.94□□□□□ -1.62
Col8a1Q00780 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col8a1Q00780 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col8a1Q00780 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm37943-201ENSMUST00000194053 3944 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.93□□□□□ -1.62
Col8a1Q00780 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col8a1Q00780 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col8a1Q00780 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms