Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.33□□□□□ -1.4
Cux1P53564 AC166343.1-201ENSMUST00000213261 577 ntBASIC6.33□□□□□ -1.4
Cux1P53564 AC154374.1-201ENSMUST00000215351 351 ntBASIC6.33□□□□□ -1.4
Cux1P53564 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC6.33□□□□□ -1.4
Cux1P53564 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cux1P53564 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cux1P53564 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cux1P53564 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Cux1P53564 Gm22531-201ENSMUST00000158819 140 ntBASIC6.32□□□□□ -1.4
Cux1P53564 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.32□□□□□ -1.4
Cux1P53564 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC6.32□□□□□ -1.4
Cux1P53564 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
Cux1P53564 Gm7381-201ENSMUST00000098958 300 ntBASIC6.32□□□□□ -1.4
Cux1P53564 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cux1P53564 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cux1P53564 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cux1P53564 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cux1P53564 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Cux1P53564 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cux1P53564 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Cux1P53564 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Gm24318-201ENSMUST00000104490 131 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Gm12564-201ENSMUST00000119860 321 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Gm37073-201ENSMUST00000192469 1222 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.31□□□□□ -1.4
Cux1P53564 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC6.31□□□□□ -1.4
Cux1P53564 AC091783.5-201ENSMUST00000224928 671 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cux1P53564 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Mir193a-201ENSMUST00000083461 66 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC6.31□□□□□ -1.4
Cux1P53564 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC6.31□□□□□ -1.4
Cux1P53564 Gm7988-201ENSMUST00000196623 2297 ntBASIC6.31□□□□□ -1.4
Cux1P53564 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Cux1P53564 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cux1P53564 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cux1P53564 Gm12311-201ENSMUST00000118803 374 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Gm43844-201ENSMUST00000202926 5605 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cux1P53564 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cux1P53564 Gm37628-201ENSMUST00000194644 5440 ntBASIC6.3□□□□□ -1.4
Cux1P53564 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cux1P53564 Gm7219-201ENSMUST00000119619 297 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cux1P53564 Gm25369-201ENSMUST00000158848 132 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Gm16026-202ENSMUST00000159695 772 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Gm7380-201ENSMUST00000211599 466 ntBASIC6.3□□□□□ -1.4
Cux1P53564 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.3□□□□□ -1.4
Cux1P53564 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cux1P53564 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cux1P53564 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cux1P53564 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cux1P53564 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cux1P53564 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cux1P53564 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cux1P53564 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cux1P53564 Gm14516-201ENSMUST00000120012 252 ntBASIC6.29□□□□□ -1.4
Cux1P53564 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cux1P53564 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC6.29□□□□□ -1.4
Cux1P53564 Fth-ps3-201ENSMUST00000210405 358 ntBASIC6.29□□□□□ -1.4
Cux1P53564 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.29□□□□□ -1.4
Cux1P53564 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cux1P53564 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cux1P53564 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Cux1P53564 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cux1P53564 Gm12897-201ENSMUST00000120341 250 ntBASIC6.28□□□□□ -1.4
Cux1P53564 Gm11982-201ENSMUST00000121480 314 ntBASIC6.28□□□□□ -1.4
Cux1P53564 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cux1P53564 Gm22889-201ENSMUST00000158639 58 ntBASIC6.28□□□□□ -1.4
Cux1P53564 AC127270.2-201ENSMUST00000221337 247 ntBASIC6.28□□□□□ -1.4
Cux1P53564 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cux1P53564 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Cux1P53564 AC123705.2-201ENSMUST00000221653 2009 ntBASIC6.27□□□□□ -1.4
Cux1P53564 AC154462.1-201ENSMUST00000228897 2260 ntBASIC6.27□□□□□ -1.41
Cux1P53564 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gm8674-201ENSMUST00000179367 3047 ntBASIC6.27□□□□□ -1.41
Cux1P53564 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gm14621-201ENSMUST00000117709 689 ntBASIC6.27□□□□□ -1.41
Cux1P53564 Gm15268-201ENSMUST00000118845 352 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms