Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Rfx1P48377 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm13114-201ENSMUST00000117605 106 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm15660-201ENSMUST00000118997 478 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm14362-201ENSMUST00000121679 273 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm14530-201ENSMUST00000122391 333 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm15254-201ENSMUST00000149567 273 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm22223-201ENSMUST00000157360 125 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm25219-201ENSMUST00000157545 330 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm28843-201ENSMUST00000189198 678 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm28404-201ENSMUST00000190242 453 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm29546-201ENSMUST00000191171 678 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm42999-201ENSMUST00000198049 786 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm42886-201ENSMUST00000199214 466 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm43026-201ENSMUST00000202972 325 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm44817-201ENSMUST00000205416 453 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm19900-201ENSMUST00000207285 576 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm7624-201ENSMUST00000209702 435 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Gm7990-201ENSMUST00000212126 593 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm8672-201ENSMUST00000221200 332 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm18620-201ENSMUST00000222295 324 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm23795-201ENSMUST00000084006 137 ntBASIC6.67□□□□□ -1.34
Rfx1P48377 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Rfx1P48377 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.67□□□□□ -1.34
Rfx1P48377 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Rfx1P48377 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Rfx1P48377 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Rfx1P48377 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm13806-201ENSMUST00000117822 325 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm13311-201ENSMUST00000117863 379 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm13866-201ENSMUST00000118901 968 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm8317-201ENSMUST00000121261 471 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm25150-201ENSMUST00000157121 60 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm28151-201ENSMUST00000189404 951 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm43601-201ENSMUST00000196294 945 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm43516-201ENSMUST00000196891 322 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm43798-201ENSMUST00000202056 394 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm44923-201ENSMUST00000206673 85 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm19033-201ENSMUST00000208516 964 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Rfx1P48377 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Rfx1P48377 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm26439-201ENSMUST00000082592 106 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm23447-201ENSMUST00000082798 163 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm17165-201ENSMUST00000096155 493 ntBASIC6.66□□□□□ -1.34
Rfx1P48377 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms