Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HttP42859 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Gm12902-201ENSMUST00000118389 322 ntBASIC4.24□□□□□ -1.73
HttP42859 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HttP42859 Gm28803-201ENSMUST00000190385 764 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm32447-201ENSMUST00000194265 697 ntBASIC4.24□□□□□ -1.73
HttP42859 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.24□□□□□ -1.73
HttP42859 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HttP42859 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Gm22023-201ENSMUST00000104354 130 ntBASIC4.24□□□□□ -1.73
HttP42859 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Gm23326-201ENSMUST00000157419 105 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm16378-201ENSMUST00000179168 342 ntBASIC4.24□□□□□ -1.73
HttP42859 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HttP42859 Gm21955-201ENSMUST00000194137 4968 ntBASIC4.24□□□□□ -1.73
HttP42859 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HttP42859 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HttP42859 Gm12358-201ENSMUST00000121842 520 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.24□□□□□ -1.73
HttP42859 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.24□□□□□ -1.73
HttP42859 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.24□□□□□ -1.73
HttP42859 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.24□□□□□ -1.73
HttP42859 Gm2189-201ENSMUST00000201419 429 ntBASIC4.24□□□□□ -1.73
HttP42859 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HttP42859 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.24□□□□□ -1.73
HttP42859 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HttP42859 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.23□□□□□ -1.73
HttP42859 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm25860-201ENSMUST00000158252 126 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm4134-201ENSMUST00000173244 563 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HttP42859 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HttP42859 Gm37151-201ENSMUST00000194631 5007 ntBASIC4.23□□□□□ -1.73
HttP42859 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HttP42859 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.23□□□□□ -1.73
HttP42859 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HttP42859 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HttP42859 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HttP42859 Gm14516-201ENSMUST00000120012 252 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm11398-201ENSMUST00000120330 320 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.23□□□□□ -1.73
HttP42859 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.23□□□□□ -1.73
HttP42859 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.23□□□□□ -1.73
HttP42859 Gm29634-201ENSMUST00000188467 696 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm28699-201ENSMUST00000189193 696 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm43774-201ENSMUST00000196327 878 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
HttP42859 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.23□□□□□ -1.73
HttP42859 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HttP42859 Snora70-201ENSMUST00000083047 137 ntBASIC4.23□□□□□ -1.73
HttP42859 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HttP42859 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HttP42859 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.22□□□□□ -1.73
HttP42859 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Gm12564-201ENSMUST00000119860 321 ntBASIC4.22□□□□□ -1.73
HttP42859 Gm22322-201ENSMUST00000157151 111 ntBASIC4.22□□□□□ -1.73
HttP42859 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Gm5551-201ENSMUST00000199720 690 ntBASIC4.22□□□□□ -1.73
HttP42859 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.22□□□□□ -1.73
HttP42859 Gm46233-201ENSMUST00000217831 449 ntBASIC4.22□□□□□ -1.73
HttP42859 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.22□□□□□ -1.73
HttP42859 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HttP42859 Gm25630-201ENSMUST00000084000 162 ntBASIC4.22□□□□□ -1.73
HttP42859 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.22□□□□□ -1.73
HttP42859 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Gm9432-201ENSMUST00000117810 759 ntBASIC4.22□□□□□ -1.73
HttP42859 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.22□□□□□ -1.73
HttP42859 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.22□□□□□ -1.73
HttP42859 Gm43932-201ENSMUST00000204499 52 ntBASIC4.22□□□□□ -1.73
HttP42859 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.22□□□□□ -1.73
HttP42859 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
HttP42859 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HttP42859 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HttP42859 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.21□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms