Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Traf1P39428 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Traf1P39428 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Traf1P39428 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.33□□□□□ -1.56
Traf1P39428 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Traf1P39428 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm14933-201ENSMUST00000118840 481 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Traf1P39428 Gm25913-201ENSMUST00000157617 135 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Traf1P39428 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm21850-201ENSMUST00000179792 359 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm27414-201ENSMUST00000185033 381 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Trbv28-201ENSMUST00000192804 264 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm45081-201ENSMUST00000206281 572 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm45857-201ENSMUST00000212207 356 ntBASIC5.33□□□□□ -1.56
Traf1P39428 AC122901.2-201ENSMUST00000216926 285 ntBASIC5.33□□□□□ -1.56
Traf1P39428 AC154828.2-201ENSMUST00000220908 1070 ntBASIC5.33□□□□□ -1.56
Traf1P39428 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.33□□□□□ -1.56
Traf1P39428 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Traf1P39428 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Traf1P39428 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Traf1P39428 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Traf1P39428 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Traf1P39428 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Traf1P39428 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.33□□□□□ -1.56
Traf1P39428 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 AC156560.3-201ENSMUST00000222978 3841 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm15141-201ENSMUST00000121860 729 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm26000-201ENSMUST00000157991 107 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Gm3077-201ENSMUST00000165903 627 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Traf1P39428 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Gm6075-201ENSMUST00000186816 486 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm29492-201ENSMUST00000187124 457 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm29196-201ENSMUST00000189239 618 ntBASIC5.32□□□□□ -1.56
Traf1P39428 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Gm8939-201ENSMUST00000192577 964 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Mir5121-201ENSMUST00000198528 74 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Trdv3-201ENSMUST00000198551 309 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.32□□□□□ -1.56
Traf1P39428 Gm17956-201ENSMUST00000199931 838 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm29793-201ENSMUST00000202874 460 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Gm44972-201ENSMUST00000206419 406 ntBASIC5.32□□□□□ -1.56
Traf1P39428 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.32□□□□□ -1.56
Traf1P39428 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Traf1P39428 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.32□□□□□ -1.56
Traf1P39428 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Traf1P39428 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Traf1P39428 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Traf1P39428 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Gm25537-201ENSMUST00000103851 109 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm25150-201ENSMUST00000157121 60 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.31□□□□□ -1.56
Traf1P39428 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Gm33626-201ENSMUST00000206790 828 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.31□□□□□ -1.56
Traf1P39428 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Traf1P39428 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Traf1P39428 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms