Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm8317-201ENSMUST00000121261 471 ntBASIC6.23□□□□□ -1.41
RaraP11416 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RaraP11416 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RaraP11416 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.23□□□□□ -1.41
RaraP11416 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm27640-201ENSMUST00000184580 147 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm28885-201ENSMUST00000185615 563 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.23□□□□□ -1.41
RaraP11416 Gm38046-201ENSMUST00000192733 550 ntBASIC6.23□□□□□ -1.41
RaraP11416 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.23□□□□□ -1.41
RaraP11416 Gm5551-201ENSMUST00000199720 690 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm43116-201ENSMUST00000199789 195 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm44295-201ENSMUST00000203805 437 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm44055-201ENSMUST00000204376 247 ntBASIC6.23□□□□□ -1.41
RaraP11416 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm29818-201ENSMUST00000218070 165 ntBASIC6.23□□□□□ -1.41
RaraP11416 AC122905.2-201ENSMUST00000220325 269 ntBASIC6.23□□□□□ -1.41
RaraP11416 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.23□□□□□ -1.41
RaraP11416 AC127371.1-201ENSMUST00000228516 312 ntBASIC6.23□□□□□ -1.41
RaraP11416 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
RaraP11416 Gm24928-201ENSMUST00000083399 107 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm25897-201ENSMUST00000083709 107 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.23□□□□□ -1.41
RaraP11416 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.23□□□□□ -1.41
RaraP11416 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RaraP11416 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.23□□□□□ -1.41
RaraP11416 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RaraP11416 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.22□□□□□ -1.41
RaraP11416 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.22□□□□□ -1.41
RaraP11416 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RaraP11416 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RaraP11416 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RaraP11416 Gm13331-201ENSMUST00000117500 448 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm12677-201ENSMUST00000118668 426 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm11447-201ENSMUST00000118983 858 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm15480-201ENSMUST00000120442 519 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm13356-201ENSMUST00000121678 335 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 Gm22261-201ENSMUST00000158691 324 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm24810-201ENSMUST00000175317 70 ntBASIC6.22□□□□□ -1.41
RaraP11416 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm18006-201ENSMUST00000177411 662 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm22584-201ENSMUST00000177935 92 ntBASIC6.22□□□□□ -1.41
RaraP11416 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm26950-201ENSMUST00000182734 498 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm27998-201ENSMUST00000184902 361 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm28615-201ENSMUST00000187527 482 ntBASIC6.22□□□□□ -1.41
RaraP11416 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.22□□□□□ -1.41
RaraP11416 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.22□□□□□ -1.41
RaraP11416 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Gm2367-201ENSMUST00000192374 472 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm2979-201ENSMUST00000193442 463 ntBASIC6.22□□□□□ -1.41
RaraP11416 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.22□□□□□ -1.41
RaraP11416 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.22□□□□□ -1.41
RaraP11416 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.22□□□□□ -1.41
RaraP11416 Gm45375-201ENSMUST00000210338 280 ntBASIC6.22□□□□□ -1.41
RaraP11416 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6.22□□□□□ -1.41
RaraP11416 Gm18487-201ENSMUST00000215826 878 ntBASIC6.22□□□□□ -1.41
RaraP11416 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.22□□□□□ -1.41
RaraP11416 Gm35558-203ENSMUST00000222264 204 ntBASIC6.22□□□□□ -1.41
RaraP11416 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.22□□□□□ -1.41
RaraP11416 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.22□□□□□ -1.41
RaraP11416 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.22□□□□□ -1.41
RaraP11416 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.22□□□□□ -1.41
RaraP11416 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RaraP11416 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RaraP11416 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RaraP11416 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms