Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.73□□□□□ -1.65
Lire1P11260 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Lire1P11260 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Lire1P11260 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Mir6516-201ENSMUST00000196236 110 ntBASIC4.73□□□□□ -1.65
Lire1P11260 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Gm42999-201ENSMUST00000198049 786 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm18127-201ENSMUST00000208479 725 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.73□□□□□ -1.65
Lire1P11260 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.73□□□□□ -1.65
Lire1P11260 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.73□□□□□ -1.65
Lire1P11260 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lire1P11260 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm23058-201ENSMUST00000093703 107 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.72□□□□□ -1.65
Lire1P11260 BC051076-202ENSMUST00000199477 2868 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm22272-201ENSMUST00000104039 134 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm15012-201ENSMUST00000119176 106 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Gm5353-201ENSMUST00000139800 793 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm26350-201ENSMUST00000157531 288 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm22725-201ENSMUST00000158092 110 ntBASIC4.72□□□□□ -1.65
Lire1P11260 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm3053-201ENSMUST00000161709 616 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Gm25534-201ENSMUST00000175365 125 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm18415-201ENSMUST00000177464 647 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Mir6926-201ENSMUST00000184562 68 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.72□□□□□ -1.65
Lire1P11260 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Mir409-201ENSMUST00000198153 79 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm43424-201ENSMUST00000200484 253 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm44074-201ENSMUST00000204562 337 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm17987-201ENSMUST00000206902 603 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Gm44857-201ENSMUST00000208331 196 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lire1P11260 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.72□□□□□ -1.65
Lire1P11260 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.72□□□□□ -1.65
Lire1P11260 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.72□□□□□ -1.65
Lire1P11260 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lire1P11260 Gm24706-201ENSMUST00000082806 137 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.72□□□□□ -1.65
Lire1P11260 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Lire1P11260 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.72□□□□□ -1.65
Lire1P11260 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lire1P11260 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lire1P11260 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.71□□□□□ -1.65
Lire1P11260 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Lire1P11260 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lire1P11260 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lire1P11260 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.71□□□□□ -1.66
Lire1P11260 Gm14086-201ENSMUST00000117152 173 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Gm11278-201ENSMUST00000121002 997 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Gm11260-201ENSMUST00000121163 942 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Gm12332-201ENSMUST00000121397 922 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms