Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Mir202-201ENSMUST00000083568 72 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm24608-201ENSMUST00000104381 136 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm12401-201ENSMUST00000118435 228 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm6062-201ENSMUST00000120462 631 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm12807-201ENSMUST00000121546 962 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm22084-201ENSMUST00000157585 105 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm27414-201ENSMUST00000185033 381 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm43370-201ENSMUST00000196437 284 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm5876-201ENSMUST00000203735 243 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm44845-201ENSMUST00000208773 335 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm18899-201ENSMUST00000217663 546 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.68□□□□□ -1.66
Chmp6P0C0A3 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm22514-201ENSMUST00000122547 308 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Mir6963-201ENSMUST00000183535 71 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm28974-201ENSMUST00000187893 231 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm29475-201ENSMUST00000190767 312 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm25147-201ENSMUST00000083030 105 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm23875-201ENSMUST00000083711 318 ntBASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Chmp6P0C0A3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm15058-201ENSMUST00000117689 458 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm14714-201ENSMUST00000119743 439 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm12564-201ENSMUST00000119860 321 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm6461-201ENSMUST00000120015 633 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm25913-201ENSMUST00000157617 135 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm26355-201ENSMUST00000158220 105 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.66□□□□□ -1.66
Chmp6P0C0A3 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms