Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hoxd3P09027 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Hoxd3P09027 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm26340-201ENSMUST00000102365 99 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm22267-201ENSMUST00000104008 131 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm13311-201ENSMUST00000117863 379 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm15553-201ENSMUST00000118757 430 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm14838-201ENSMUST00000118913 248 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm11445-201ENSMUST00000119101 532 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm14613-201ENSMUST00000122239 752 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm24858-201ENSMUST00000158058 323 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm24100-201ENSMUST00000178592 79 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm24137-201ENSMUST00000180055 79 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm22391-201ENSMUST00000180356 79 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm27928-201ENSMUST00000183747 256 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm27254-201ENSMUST00000183926 517 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm43160-201ENSMUST00000196453 421 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm31211-201ENSMUST00000199170 253 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm7721-201ENSMUST00000200446 546 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm43456-201ENSMUST00000202519 457 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm18586-201ENSMUST00000217265 518 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm10237-201ENSMUST00000078393 273 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.18□□□□□ -1.58
Hoxd3P09027 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.17□□□□□ -1.58
Hoxd3P09027 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Hoxd3P09027 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hoxd3P09027 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms