Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col3a1P08121 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col3a1P08121 Mir6996-201ENSMUST00000183922 61 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm21803-201ENSMUST00000188897 693 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm28926-201ENSMUST00000191063 680 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm43774-201ENSMUST00000196327 878 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm43853-201ENSMUST00000197162 301 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.58
Col3a1P08121 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.15□□□□□ -1.58
Col3a1P08121 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.15□□□□□ -1.58
Col3a1P08121 AC159293.2-201ENSMUST00000222289 424 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 AC115357.1-201ENSMUST00000227575 466 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm5548-201ENSMUST00000055878 397 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col3a1P08121 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
Col3a1P08121 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col3a1P08121 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.15□□□□□ -1.58
Col3a1P08121 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.15□□□□□ -1.59
Col3a1P08121 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col3a1P08121 Gm43341-201ENSMUST00000200104 1308 ntBASIC5.15□□□□□ -1.59
Col3a1P08121 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Col3a1P08121 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col3a1P08121 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.14□□□□□ -1.59
Col3a1P08121 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm13785-201ENSMUST00000119099 690 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm25177-201ENSMUST00000122634 117 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm23781-201ENSMUST00000157940 308 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm22135-201ENSMUST00000158752 108 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm22693-201ENSMUST00000175049 442 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm23510-201ENSMUST00000083083 163 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col3a1P08121 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col3a1P08121 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col3a1P08121 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.14□□□□□ -1.59
Col3a1P08121 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.14□□□□□ -1.59
Col3a1P08121 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col3a1P08121 Mir466f-3-201ENSMUST00000104788 94 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm14417-201ENSMUST00000120036 1074 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm13460-201ENSMUST00000121274 353 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm15534-201ENSMUST00000137642 562 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm6182-201ENSMUST00000156439 1208 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm22816-201ENSMUST00000157450 117 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm44353-201ENSMUST00000200618 138 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Col3a1P08121 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col3a1P08121 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col3a1P08121 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm11432-201ENSMUST00000117334 231 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm5757-201ENSMUST00000117494 528 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm6071-201ENSMUST00000119561 440 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm6650-201ENSMUST00000166710 614 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm23215-201ENSMUST00000178153 121 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm29484-201ENSMUST00000186067 324 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.13□□□□□ -1.59
Col3a1P08121 Gm43304-201ENSMUST00000196803 326 ntBASIC5.13□□□□□ -1.59
Col3a1P08121 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms