Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.71□□□□□ -1.66
Cbx4O55187 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.71□□□□□ -1.66
Cbx4O55187 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cbx4O55187 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cbx4O55187 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cbx4O55187 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm16089-201ENSMUST00000117679 336 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm13213-201ENSMUST00000119668 474 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm14739-201ENSMUST00000120424 802 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm12880-201ENSMUST00000120652 494 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm16254-201ENSMUST00000131528 730 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm23317-201ENSMUST00000157999 129 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Mir7222-201ENSMUST00000183740 75 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm29460-201ENSMUST00000188607 714 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm28389-201ENSMUST00000190090 697 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm45228-201ENSMUST00000206585 352 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm21112-201ENSMUST00000212224 578 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm7760-201ENSMUST00000212265 578 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm7807-201ENSMUST00000212475 578 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm34005-201ENSMUST00000215834 282 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm5457-201ENSMUST00000022260 333 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cbx4O55187 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm23846-201ENSMUST00000083835 107 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.7□□□□□ -1.66
Cbx4O55187 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cbx4O55187 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Cbx4O55187 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Cbx4O55187 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cbx4O55187 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.69□□□□□ -1.66
Cbx4O55187 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm8475-201ENSMUST00000118211 526 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm15493-201ENSMUST00000119461 528 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm14619-201ENSMUST00000120480 168 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm12893-201ENSMUST00000121732 275 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm13471-201ENSMUST00000122057 433 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.69□□□□□ -1.66
Cbx4O55187 Gm6182-201ENSMUST00000156439 1208 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm22940-201ENSMUST00000158560 155 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Gm16236-201ENSMUST00000159588 379 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Cbx4O55187 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.69□□□□□ -1.66
Cbx4O55187 Gm28437-201ENSMUST00000190277 783 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm42579-201ENSMUST00000200512 734 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm44857-201ENSMUST00000208331 196 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC4.69□□□□□ -1.66
Cbx4O55187 Gm7639-201ENSMUST00000212608 484 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cbx4O55187 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.69□□□□□ -1.66
Cbx4O55187 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 AC164116.2-201ENSMUST00000225398 1038 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.69□□□□□ -1.66
Cbx4O55187 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms