Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37436-201ENSMUST00000193842 1085 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm32308-201ENSMUST00000203053 280 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm7838-201ENSMUST00000203221 1189 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm44138-201ENSMUST00000204939 271 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm18877-201ENSMUST00000207706 539 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 CT025523.1-201ENSMUST00000228318 694 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hmgb3O54879 n-R5s36-201ENSMUST00000082998 119 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hmgb3O54879 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Hmgb3O54879 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Hmgb3O54879 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Hmgb3O54879 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Hmgb3O54879 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmgb3O54879 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm12340-201ENSMUST00000121617 462 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm16345-201ENSMUST00000146065 158 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm23537-201ENSMUST00000157536 330 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm2389-201ENSMUST00000160487 189 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm16303-201ENSMUST00000161498 390 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm3030-201ENSMUST00000163410 516 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm3339-201ENSMUST00000163462 475 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Hmgb3O54879 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm22243-201ENSMUST00000178754 120 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm27960-201ENSMUST00000183445 184 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm19503-201ENSMUST00000187109 241 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm29281-201ENSMUST00000188077 381 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm28467-201ENSMUST00000190981 318 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm28267-201ENSMUST00000191093 265 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm37111-201ENSMUST00000193250 634 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm6057-201ENSMUST00000195927 314 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm43730-201ENSMUST00000199863 372 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm3690-201ENSMUST00000211341 262 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.4□□□□□ -1.87
Hmgb3O54879 AC154583.1-201ENSMUST00000224788 655 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmgb3O54879 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmgb3O54879 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmgb3O54879 Snord15b-201ENSMUST00000083032 145 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Mir31-201ENSMUST00000083474 106 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.4□□□□□ -1.87
Hmgb3O54879 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmgb3O54879 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Hmgb3O54879 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm11914-201ENSMUST00000117094 507 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm14854-201ENSMUST00000117758 841 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm15021-201ENSMUST00000117832 742 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm12486-201ENSMUST00000120887 541 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm22988-201ENSMUST00000122759 144 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm25966-201ENSMUST00000157169 117 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm3531-201ENSMUST00000162698 489 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm9499-201ENSMUST00000180888 964 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm43768-201ENSMUST00000198380 1258 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm44002-201ENSMUST00000205134 594 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm45499-201ENSMUST00000211656 280 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC3.39□□□□□ -1.87
Hmgb3O54879 Gm7093-201ENSMUST00000223004 581 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.39□□□□□ -1.87
Hmgb3O54879 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms