Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm25116-201ENSMUST00000157191 122 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm23098-201ENSMUST00000157552 299 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm22398-201ENSMUST00000174941 125 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm25731-201ENSMUST00000175167 125 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Mir1251-201ENSMUST00000175486 84 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm28660-201ENSMUST00000186496 253 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Scn3aA2ASI5 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Scn3aA2ASI5 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Scn3aA2ASI5 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.59□□□□□ -1.68
Scn3aA2ASI5 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Scn3aA2ASI5 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Scn3aA2ASI5 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm24581-201ENSMUST00000103962 133 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Mir713-201ENSMUST00000178651 108 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm17954-201ENSMUST00000195893 607 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm45796-201ENSMUST00000212483 114 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm23443-201ENSMUST00000082916 128 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Mir132-201ENSMUST00000083603 66 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm18547-201ENSMUST00000192439 811 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.58□□□□□ -1.68
Scn3aA2ASI5 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm11372-201ENSMUST00000117348 570 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm8745-201ENSMUST00000207846 782 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Scn3aA2ASI5 Gm10552-201ENSMUST00000113396 372 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm12335-201ENSMUST00000119738 327 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm4248-201ENSMUST00000196905 316 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm18429-201ENSMUST00000198707 421 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm8703-201ENSMUST00000203793 730 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scn3aA2ASI5 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms