Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx9Q9WUH2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.69■□□□□ 0.26
Lhx9Q9WUH2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx9Q9WUH2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx9Q9WUH2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Gm13559-201ENSMUST00000120476 863 ntBASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx9Q9WUH2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lhx9Q9WUH2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Gm10418-201ENSMUST00000100943 576 ntBASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx9Q9WUH2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx9Q9WUH2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx9Q9WUH2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx9Q9WUH2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx9Q9WUH2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx9Q9WUH2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lhx9Q9WUH2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms