Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn8aQ9WTU3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn8aQ9WTU3 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn8aQ9WTU3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn8aQ9WTU3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn8aQ9WTU3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn8aQ9WTU3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Scn8aQ9WTU3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms