Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atp6ap1Q9R1Q9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.15■□□□□ 0.34
Atp6ap1Q9R1Q9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Atp6ap1Q9R1Q9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.14■□□□□ 0.34
Atp6ap1Q9R1Q9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atp6ap1Q9R1Q9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atp6ap1Q9R1Q9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atp6ap1Q9R1Q9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms