Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.25■□□□□ 0.67
Phtf1Q9QZ09 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phtf1Q9QZ09 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phtf1Q9QZ09 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phtf1Q9QZ09 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phtf1Q9QZ09 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Gm24841-201ENSMUST00000158676 357 ntBASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Gm3375-201ENSMUST00000203929 796 ntBASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Odf3b-204ENSMUST00000227834 930 ntBASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Phtf1Q9QZ09 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Timm23-208ENSMUST00000226683 750 ntBASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phtf1Q9QZ09 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phtf1Q9QZ09 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Phtf1Q9QZ09 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Mir6982-201ENSMUST00000184354 68 ntBASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phtf1Q9QZ09 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Gm38027-201ENSMUST00000192315 235 ntBASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Gm5417-201ENSMUST00000079706 384 ntBASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phtf1Q9QZ09 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.18■□□□□ 0.66
Phtf1Q9QZ09 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms