Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr2e3Q9QXZ7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr2e3Q9QXZ7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.8■□□□□ 0.76
Nr2e3Q9QXZ7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nr2e3Q9QXZ7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr2e3Q9QXZ7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Gm24841-201ENSMUST00000158676 357 ntBASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr2e3Q9QXZ7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.77■□□□□ 0.75
Nr2e3Q9QXZ7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nr2e3Q9QXZ7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Gm12085-201ENSMUST00000119263 940 ntBASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Gm10252-201ENSMUST00000209541 832 ntBASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr2e3Q9QXZ7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms