Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm5417-201ENSMUST00000079706 384 ntBASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Mir6982-201ENSMUST00000184354 68 ntBASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Gm8969-201ENSMUST00000199694 526 ntBASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx5Q9JL61 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx5Q9JL61 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx5Q9JL61 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Rfx5Q9JL61 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx5Q9JL61 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfx5Q9JL61 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Rfx5Q9JL61 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms